Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935548.1_cds_XP_016481338.1_72676
CDS Infomation

[gene=LOC107802370] [db_xref=GeneID:107802370] [protein=two-component response regulator ARR1-like isoform X2] [protein_id=XP_016481338.1] [location=join(5194..5305,5749..5901,5996..6382,7970..8046,8207..9380,9487..9563)] [gbkey=CDS]
Sequence

ATGTCAACTGTCTCTGATCAGTTTCCAGTGGGACTCCGGGTGCTTGTAGTTGATGATGAC
CCTACTTGCTTAAGGATCTTGGAGAAGATGCTCAGGAACTGCCATTATCAAGTCACCAAG
TGTAATAGGGCTGAGGTTGCCTTATCGTTGCTCCGCGAAAACAAGAATGGATTTGACATT
GTTATAAGTGATGTCCATATGCCAGACATGGATGGTTTCAAACTTCTTGAGCACATTGGT
CTGGAGATGGACCTGCCTGTTATAATGATGTCTGCGGATGATAGTAAGGATGTGGTTATG
AAAGGAGTTACTCATGGTGCATATGATTATCTGATCAAACCGGTGCGGATTGAGGCGCTG
AAGAATATTTGGCAGCATGTTGTTCGTAAAAAGAAGCATGAGTGGAAGGACAACAATTAC
GATCAATCTGGAAGTGTGGAAGAAGGAGATCGGCAGCAGAAACTGCCAGAAGATGCTGAT
TACTCATCTTCAGCTAATGAAGGAAACTGGAGAAACTCGAAGAAAAGAAAGGAAGAGGAA
GAAGAAGCTGAAGAAAGGGACGATACAGCCACATTAAAGAAGCCACGTGTTGTTTGGTCA
GTGGAGCTTCATCAACAATTTGTGCAAGCTGTGCATCAACTTGGAATTGACAAGGCCGTT
CCGAAGAAAATTCTGGAACTGATGAACGTTCCTGGACTAACCAGAGAAAATGTTGCTAGC
CACCTTCAGAAATATCGGTTGTATCTCAGAAGGTTGAGTGGTGTATCACAGCACCAGAGT
AGTTTGAACAACTCGTTCATGGGACGCCCAGACGCAACCTTTGGCACAATATCTTCCCTC
AACGGGCTTGATCTTCAAGCTATTTCTGCCGCTGGTCAAGTCCCTGCGCAAAGTCTTGCT
ACCCTCCAAGCAGCGGCCCTAGGTAGATCTGCTGCTACAAAATCTGCCATATCTATGCCC
CTAGTAGATCAAAGAAACCTTTTTAGCTTCGAAAATTCCAAGTTGAGATTTCCAGAAGGG
CAACAACAACTAAATAATAGCAATAAGCAAATTGACTTGCTGCATGGAATCCCAACCACC
ATGGAGCCAAAGCAGCTTGCTAATTTACACCACCCTTCCCAGTCCTTCGTGAGTATGAAT
ACGCAAGTGAACTCCATGGCACAACATAATAATCCTTTGCTTTTGAGAATGTCCCAATCA
CAACCTAGGGCTCAAATGCTAAATGGAGCGAATAATGGCCATCAAGTTTCGAGGCTTCCA
TTATCCATGCAGCAACCTTTGTCGCCAGAGGGGATACCTGGTACTGTCCCAGCACAGAGT
GGTATTGTTGACAATGCACGAGGGAGCGTGTACAATCCAGTCTCCCAATCATCTTCAATG
GTAGATTTCTCGCTAAATCAAAGCAAGGAGTTGCAAAGCTACAACTTTTCTCTTGGGAGT
AATAATTCAGGGATGCCCACTTTGACCAATAGAGGGATGCTTCAGGAAGAGATGAACTCC
GACATCAAAGGATCTAGAGGATTCCCTTCTAATTATGATATGTTCAATGAACTCCATCAG
CAAAAATCACAGAACTGGGATTTACAGAATGTTGGGTCAACCTTTGATGCCTCTCATCAT
CCAAGTATACAAGGAACTCGGGGTGTCTCATCACAATTGTTACTTCAGCAAGGGATCTCT
TCAACACACCACAGTGGACAAAACAGAAATGCTCCTAGTGGTAAACCATTGTACTCCAAT
GCGGATGAAAGTGGACATTTTAATCCTATGGGTGGACCACAACTTAACTCTCTTGGTGGA
AATATGCTTGCTGTTAAAGCTGAAAGATTTTCCGACTCAGACTATCACAGTACCATTTAC
CACGAGCAATTTGGACAGGAGGACCTCATGAGTGCCTTCTTAAAACAGCAAGGAAATGTT
GGACCAGTTGAAACTGAATTTGGCTTCGATGCATACACACTGGACAATCTTCCTGTGTGA

Peptide Sequence

PEP ID

XP_016481338.1
PEP Infomation

PREDICTED: two-component response regulator ARR1-like isoform X2 [Nicotiana tabacum]
Sequence

MSTVSDQFPVGLRVLVVDDDPTCLRILEKMLRNCHYQVTKCNRAEVALSLLRENKNGFDI
VISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKDVVMKGVTHGAYDYLIKPVRIEAL
KNIWQHVVRKKKHEWKDNNYDQSGSVEEGDRQQKLPEDADYSSSANEGNWRNSKKRKEEE
EEAEERDDTATLKKPRVVWSVELHQQFVQAVHQLGIDKAVPKKILELMNVPGLTRENVAS
HLQKYRLYLRRLSGVSQHQSSLNNSFMGRPDATFGTISSLNGLDLQAISAAGQVPAQSLA
TLQAAALGRSAATKSAISMPLVDQRNLFSFENSKLRFPEGQQQLNNSNKQIDLLHGIPTT
MEPKQLANLHHPSQSFVSMNTQVNSMAQHNNPLLLRMSQSQPRAQMLNGANNGHQVSRLP
LSMQQPLSPEGIPGTVPAQSGIVDNARGSVYNPVSQSSSMVDFSLNQSKELQSYNFSLGS
NNSGMPTLTNRGMLQEEMNSDIKGSRGFPSNYDMFNELHQQKSQNWDLQNVGSTFDASHH
PSIQGTRGVSSQLLLQQGISSTHHSGQNRNAPSGKPLYSNADESGHFNPMGGPQLNSLGG
NMLAVKAERFSDSDYHSTIYHEQFGQEDLMSAFLKQQGNVGPVETEFGFDAYTLDNLPV

Transcript Sequence

Gene sequence data has not been registered.